avgfp · Sequence CNN

paper_avgfp_cnn_20261103-172620

Metrics

Set	mse	pearsonr	spearmanr	r2
test	0.0954	0.9566	0.8670	0.9150
train	0.0652	0.9706	0.8848	0.9420
validation	0.0970	0.9561	0.8691	0.9138

Loss per epoch

training validation

Config

name: paper_avgfp_cnn
task: dms
data:
  dataset: avgfp
  encoding: one_hot,aa_index
  split_dir: avgfp/splits/main
model:
  name: cnn
  conv:
  - - 128
    - 3
  - - 128
    - 3
  - - 128
    - 3
  - - 128
    - 3
  - - 128
    - 3
  hidden:
  - 100
  dropout: 0.2
train:
  epochs: 300
  batch_size: 64
  learning_rate: 0.001
  patience: 15
  min_delta: 1.0e-05
  seed: 7