pab1 · Fully connected

paper_pab1_fc_20261103-140113

Metrics

Set	mse	pearsonr	spearmanr	r2
test	0.8104	0.8927	0.8697	0.7869
train	0.7579	0.8992	0.8754	0.7983
validation	0.7592	0.8943	0.8684	0.7905

Loss per epoch

training validation

Config

name: paper_pab1_fc
task: dms
data:
  dataset: pab1
  encoding: one_hot,aa_index
  split_dir: pab1/splits/main
model:
  name: fcn
  hidden:
  - 100
  - 100
  - 100
  dropout: 0.2
train:
  epochs: 300
  batch_size: 128
  learning_rate: 0.001
  patience: 15
  min_delta: 1.0e-05
  seed: 7