ube4b · Fully connected

paper_ube4b_fc_20261103-180016

Metrics

Set	mse	pearsonr	spearmanr	r2
test	2.1404	0.6531	0.6201	0.4265
train	2.0777	0.6738	0.6348	0.4534
validation	2.2029	0.6494	0.6129	0.4215

Loss per epoch

training validation

Config

name: paper_ube4b_fc
task: dms
data:
  dataset: ube4b
  encoding: one_hot,aa_index
  split_dir: ube4b/splits/main
model:
  name: fcn
  hidden:
  - 100
  - 100
  - 100
  dropout: 0.2
train:
  epochs: 300
  batch_size: 64
  learning_rate: 0.0001
  patience: 15
  min_delta: 1.0e-05
  seed: 7