Protein Engineering

avgfp · Fully connected

reference_avgfp_fc_plm_modulof0_20261104-174947

Metrics

Setmsepearsonrspearmanrr2above_wt_nabove_wt_spearmanrbudget_to_maxhit_rate_at_10mean_at_10max_at_10precision_at_10tie_share_at_10captured_at_10hit_rate_at_50mean_at_50max_at_50precision_at_50tie_share_at_50captured_at_50hit_rate_at_100mean_at_100max_at_100precision_at_100tie_share_at_100captured_at_100hit_rate_at_1pctmean_at_1pctmax_at_1pctprecision_at_1pcttie_share_at_1pctcaptured_at_1pct
train0.32580.90250.79830.63391210.00000.1899768.00000.60003.72563.84860.00000.00000.68270.42003.69013.89920.00000.00000.70350.43003.70414.07250.08000.00000.75050.40433.69634.01080.05320.00000.7391
validation0.5579-0.1030-0.0774-0.1043216.00000.1366846.00000.30003.13983.83140.00000.0000-0.26720.24003.08463.83140.04000.0000-0.42520.21003.16843.97910.12000.0000-0.29620.27273.15423.83140.00000.0000-0.2488
test0.6132-0.0544-0.0317-0.0790146.00000.0478103.00000.00002.63153.70310.00000.0000-1.06630.14002.79323.95460.08000.0000-0.96550.18002.96644.00870.14000.0000-0.69640.00002.61983.70310.00000.0000-1.0528

Loss per epoch

training validation

Config

name: reference_avgfp_fc_plm_modulof0
task: dms
data:
  dataset: avgfp
  encoding: one_hot,aa_index,plm,plm_sum
  split_dir: null
  split_scheme: modulo
  split_fold: 0
model:
  name: fcn
  hidden:
  - 100
  - 100
  - 100
  dropout: 0.2
train:
  epochs: 300
  batch_size: 32
  learning_rate: 0.0001
  patience: 15
  min_delta: 1.0e-05
  seed: 7