Protein Engineering

avgfp · Linear

reference_avgfp_lr_modulof2_20261104-163107

Metrics

Setmsepearsonrspearmanrr2above_wt_nabove_wt_spearmanrbudget_to_maxhit_rate_at_10mean_at_10max_at_10precision_at_10tie_share_at_10captured_at_10hit_rate_at_50mean_at_50max_at_50precision_at_50tie_share_at_50captured_at_50hit_rate_at_100mean_at_100max_at_100precision_at_100tie_share_at_100captured_at_100hit_rate_at_1pctmean_at_1pctmax_at_1pctprecision_at_1pcttie_share_at_1pctcaptured_at_1pct
train0.72560.37540.32590.11661577.00000.08431736.00000.20003.36603.77060.00000.00000.28990.20003.13053.82420.00000.00000.05480.21003.20833.87270.00000.00000.14560.20373.21483.87270.00000.00000.1538
validation0.8367-0.1316-0.0346-0.1891111.00000.0550486.00000.30002.12343.85660.10000.0000-1.48460.16002.40613.85660.10000.0000-1.24370.16002.81423.85660.15000.0000-0.63660.28572.07203.85660.00000.0000-1.5123
test0.5485-0.0739-0.0812-0.1800135.00000.0828793.00000.00002.79963.61470.00000.0000-0.98740.12003.12633.92100.06000.0000-0.46680.16003.29633.92100.12000.0000-0.12300.00002.89723.61470.00000.0000-0.8015

Loss per epoch

training validation

Config

name: reference_avgfp_lr_modulof2
task: dms
data:
  dataset: avgfp
  encoding: one_hot,aa_index
  split_dir: null
  split_scheme: modulo
  split_fold: 2
model:
  name: lr
train:
  epochs: 300
  batch_size: 128
  learning_rate: 0.0001
  patience: 15
  min_delta: 1.0e-05
  seed: 7