Protein Engineering

avgfp · Linear

reference_avgfp_lr_plm_modulof3_20261105-035843

Metrics

Setmsepearsonrspearmanrr2above_wt_nabove_wt_spearmanrbudget_to_maxhit_rate_at_10mean_at_10max_at_10precision_at_10tie_share_at_10captured_at_10hit_rate_at_50mean_at_50max_at_50precision_at_50tie_share_at_50captured_at_50hit_rate_at_100mean_at_100max_at_100precision_at_100tie_share_at_100captured_at_100hit_rate_at_1pctmean_at_1pctmax_at_1pctprecision_at_1pcttie_share_at_1pctcaptured_at_1pct
train0.68000.44280.38930.17731547.00000.11171641.00000.10003.51633.83110.00000.00000.44430.06003.31083.85360.00000.00000.25600.12003.26173.97350.01000.00000.21060.11213.28033.97350.00930.00000.2329
validation0.5884-0.0474-0.0300-0.1734152.00000.0413325.00000.10002.86463.77850.00000.0000-0.76970.20003.19503.82890.04000.0000-0.26420.24003.21523.89210.16000.0000-0.24390.00002.65633.70310.00000.0000-1.0945
test0.7932-0.08610.0055-0.1272111.00000.0298424.00000.00002.43863.69390.00000.0000-1.04620.08002.96753.89490.04000.0000-0.35400.18003.04293.89490.18000.0000-0.25000.00002.31303.69390.00000.0000-1.1866

Loss per epoch

training validation

Config

name: reference_avgfp_lr_plm_modulof3
task: dms
data:
  dataset: avgfp
  encoding: one_hot,aa_index,plm,plm_sum
  split_dir: null
  split_scheme: modulo
  split_fold: 3
model:
  name: lr
train:
  epochs: 300
  batch_size: 128
  learning_rate: 0.0001
  patience: 15
  min_delta: 1.0e-05
  seed: 7