bgl3 · Fully connected
reference_bgl3_fc_mr5plm_contiguousf0_20261104-222338
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 1.8654 | 0.4722 | 0.4931 | 0.0521 | 156.0000 | -0.0532 | 539.0000 | 0.2000 | -0.6683 | 0.2173 | 0.0000 | 0.0000 | 0.4208 | 0.1000 | -1.0052 | 0.3961 | 0.0400 | 0.0000 | 0.3292 | 0.0900 | -0.9395 | 0.7630 | 0.0600 | 0.0000 | 0.3856 | 0.1143 | -0.9805 | 0.2173 | 0.0000 | 0.0000 | 0.3296 |
| validation | 0.8886 | 0.6423 | 0.6699 | 0.3807 | 40.0000 | 0.0798 | 248.0000 | 0.0000 | -1.1060 | -0.0136 | 0.0000 | 0.0000 | 0.0830 | 0.0800 | -0.6004 | 0.1987 | 0.1200 | 0.0000 | 0.4694 | 0.1000 | -0.4873 | 0.4008 | 0.2600 | 0.0000 | 0.6010 | 0.0000 | -1.2015 | -0.0136 | 0.0000 | 0.0000 | 0.0266 |
| test | 1.4793 | 0.5390 | 0.5764 | 0.1288 | 21.0000 | -0.1916 | 177.0000 | 0.0000 | -0.6726 | -0.1154 | 0.0000 | 0.0000 | 0.5359 | 0.0800 | -0.7610 | 0.2019 | 0.1000 | 0.0000 | 0.5683 | 0.0500 | -0.9007 | 0.2019 | 0.2600 | 0.0000 | 0.5276 | 0.0000 | -0.8478 | -0.1154 | 0.0000 | 0.0000 | 0.4614 |
Loss per epoch
training
validation
Config
name: reference_bgl3_fc_mr5plm_contiguousf0 task: dms data: dataset: bgl3 encoding: one_hot,aa_index,plm,plm_sum split_dir: null split_scheme: contiguous split_fold: 0 min_reads: 5 model: name: fcn hidden: - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 32 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7