bgl3 · Fully connected
reference_bgl3_fc_mr5plm_contiguousf2_20261104-222725
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 1.1793 | 0.5967 | 0.6353 | 0.3328 | 152.0000 | -0.0501 | 931.0000 | 0.1000 | -0.7324 | 0.1164 | 0.0000 | 0.0000 | 0.3841 | 0.0600 | -0.5831 | 0.1164 | 0.0000 | 0.0000 | 0.5188 | 0.1300 | -0.6236 | 0.2019 | 0.0700 | 0.0000 | 0.5283 | 0.0625 | -0.7840 | 0.1164 | 0.0000 | 0.0000 | 0.3965 |
| validation | 1.3586 | 0.5109 | 0.5052 | 0.2481 | 38.0000 | -0.0255 | 262.0000 | 0.3000 | -1.5857 | 0.3961 | 0.1000 | 0.0000 | -0.0292 | 0.1000 | -1.4623 | 0.3961 | 0.1000 | 0.0000 | 0.0351 | 0.0800 | -1.3652 | 0.7630 | 0.1300 | 0.0000 | 0.1001 | 0.2727 | -1.6053 | 0.3961 | 0.0909 | 0.0000 | -0.0388 |
| test | 1.8304 | 0.3484 | 0.3177 | 0.0398 | 26.0000 | -0.1542 | 678.0000 | 0.0000 | -1.5651 | -0.2397 | 0.0000 | 0.0000 | 0.0907 | 0.0000 | -1.8898 | -0.1352 | 0.0000 | 0.0000 | -0.0755 | 0.0000 | -1.7644 | -0.1352 | 0.0400 | 0.0000 | -0.0068 | 0.0000 | -1.6891 | -0.2397 | 0.0000 | 0.0000 | 0.0311 |
Loss per epoch
training
validation
Config
name: reference_bgl3_fc_mr5plm_contiguousf2 task: dms data: dataset: bgl3 encoding: one_hot,aa_index,plm,plm_sum split_dir: null split_scheme: contiguous split_fold: 2 min_reads: 5 model: name: fcn hidden: - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 32 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7