bgl3 · Fully connected
reference_bgl3_fc_mr5plm_modulof1_20261104-222455
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 1.2124 | 0.5089 | 0.5189 | 0.2372 | 136.0000 | 0.0975 | 785.0000 | 0.2000 | -1.0382 | 0.2173 | 0.0000 | 0.0000 | 0.1616 | 0.0800 | -0.9673 | 0.3961 | 0.0400 | 0.0000 | 0.2283 | 0.0700 | -1.0399 | 0.7630 | 0.0600 | 0.0000 | 0.1996 | 0.1481 | -0.9778 | 0.3961 | 0.0370 | 0.0000 | 0.2086 |
| validation | 0.9366 | 0.4504 | 0.5168 | 0.2028 | 23.0000 | -0.2476 | 155.0000 | 0.0000 | -1.5192 | -0.0455 | 0.0000 | 0.0000 | -0.3020 | 0.0600 | -0.9459 | 0.1421 | 0.1200 | 0.0000 | 0.1375 | 0.0700 | -0.6928 | 0.1448 | 0.3000 | 0.0000 | 0.3840 | 0.0000 | -1.5283 | -0.0455 | 0.0000 | 0.0000 | -0.3021 |
| test | 0.7522 | 0.5972 | 0.6126 | 0.3335 | 47.0000 | -0.1836 | 120.0000 | 0.0000 | -0.1860 | -0.0136 | 0.0000 | 0.0000 | 0.5231 | 0.1400 | -0.3158 | 0.2019 | 0.1800 | 0.0000 | 0.5804 | 0.1400 | -0.3247 | 0.2216 | 0.2900 | 0.0000 | 0.6352 | 0.0000 | -0.1720 | -0.0136 | 0.0000 | 0.0000 | 0.4948 |
Loss per epoch
training
validation
Config
name: reference_bgl3_fc_mr5plm_modulof1 task: dms data: dataset: bgl3 encoding: one_hot,aa_index,plm,plm_sum split_dir: null split_scheme: modulo split_fold: 1 min_reads: 5 model: name: fcn hidden: - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 32 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7