bgl3 · Fully connected
reference_bgl3_fc_plm_contiguousf3_20261105-040512
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 1.8639 | 0.2921 | 0.2516 | 0.0548 | 4815.0000 | -0.0160 | 2847.0000 | 0.6000 | 0.5009 | 2.0174 | 0.0000 | 0.0000 | 0.2733 | 0.5800 | 0.4813 | 2.3136 | 0.0000 | 0.0000 | 0.3040 | 0.5300 | 0.2560 | 2.3136 | 0.0200 | 0.0000 | 0.2432 | 0.5362 | 0.2558 | 2.3136 | 0.0362 | 0.0000 | 0.2501 |
| validation | 1.6656 | 0.2495 | 0.2002 | 0.0622 | 1997.0000 | -0.1358 | 265.0000 | 0.5000 | -0.0055 | 1.0480 | 0.0000 | 0.0000 | 0.0619 | 0.5400 | 0.0082 | 2.0841 | 0.0000 | 0.0000 | 0.0764 | 0.4200 | -0.0712 | 2.0841 | 0.0100 | 0.0000 | 0.0488 | 0.5532 | 0.0167 | 2.0841 | 0.0000 | 0.0000 | 0.0793 |
| test | 1.8480 | 0.2757 | 0.1899 | 0.0459 | 1899.0000 | -0.0811 | 2986.0000 | 0.4000 | -1.0046 | 1.5945 | 0.0000 | 0.0000 | -0.2272 | 0.5600 | -0.1263 | 2.0841 | 0.0000 | 0.0000 | 0.0567 | 0.4700 | -0.3710 | 2.5002 | 0.0300 | 0.0000 | -0.0341 | 0.5510 | -0.1614 | 2.0841 | 0.0000 | 0.0000 | 0.0439 |
Loss per epoch
training
validation
Config
name: reference_bgl3_fc_plm_contiguousf3 task: dms data: dataset: bgl3 encoding: one_hot,aa_index,plm,plm_sum split_dir: null split_scheme: contiguous split_fold: 3 model: name: fcn hidden: - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 32 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7