Protein Engineering

bgl3 · Linear

reference_bgl3_lr_contiguousf4_20261104-170502

Metrics

Setmsepearsonrspearmanrr2above_wt_nabove_wt_spearmanrbudget_to_maxhit_rate_at_10mean_at_10max_at_10precision_at_10tie_share_at_10captured_at_10hit_rate_at_50mean_at_50max_at_50precision_at_50tie_share_at_50captured_at_50hit_rate_at_100mean_at_100max_at_100precision_at_100tie_share_at_100captured_at_100hit_rate_at_1pctmean_at_1pctmax_at_1pctprecision_at_1pcttie_share_at_1pctcaptured_at_1pct
train2.06920.07150.0693-0.05095893.00000.003814188.00000.6000-0.27261.59450.00000.00000.01260.4800-0.32781.86900.00000.0000-0.00460.5500-0.01371.94590.00000.00000.10700.5066-0.09791.94590.00000.00000.0796
validation1.99600.07460.06510.00401218.0000-0.05921526.00000.50000.21961.48330.00000.00000.25580.3800-0.08721.78560.00000.00000.19830.3900-0.20763.32290.02000.00000.17020.4186-0.05291.78560.00000.00000.2067
test2.03260.0011-0.0013-0.14451997.0000-0.02432768.00000.5000-0.03561.21500.00000.00000.05170.52000.10301.94590.00000.00000.11320.55000.13112.20540.02000.00000.13270.48940.04741.94590.00000.00000.0911

Loss per epoch

training validation

Config

name: reference_bgl3_lr_contiguousf4
task: dms
data:
  dataset: bgl3
  encoding: one_hot,aa_index
  split_dir: null
  split_scheme: contiguous
  split_fold: 4
model:
  name: lr
train:
  epochs: 300
  batch_size: 128
  learning_rate: 0.0001
  patience: 15
  min_delta: 1.0e-05
  seed: 7