Protein Engineering

bgl3 · Linear

reference_bgl3_lr_modulof2_20261104-163153

Metrics

Setmsepearsonrspearmanrr2above_wt_nabove_wt_spearmanrbudget_to_maxhit_rate_at_10mean_at_10max_at_10precision_at_10tie_share_at_10captured_at_10hit_rate_at_50mean_at_50max_at_50precision_at_50tie_share_at_50captured_at_50hit_rate_at_100mean_at_100max_at_100precision_at_100tie_share_at_100captured_at_100hit_rate_at_1pctmean_at_1pctmax_at_1pctprecision_at_1pcttie_share_at_1pctcaptured_at_1pct
train1.83220.07370.0687-0.00233477.0000-0.0203974.00000.3000-0.96761.86900.00000.0000-0.19520.4400-0.19761.86900.00000.00000.04970.4400-0.20721.86900.00000.00000.04900.4421-0.20561.86900.00000.00000.0494
validation1.38570.05170.0749-0.0050437.0000-0.0190568.00000.70000.16551.59450.00000.00000.18780.3600-0.22261.59450.02000.00000.07760.3400-0.23512.31360.11000.00000.08220.5000-0.04891.59450.00000.00000.1241
test1.5826-0.0289-0.0172-0.0267432.0000-0.0514181.00000.2000-1.43781.04800.00000.0000-0.31720.2800-0.85142.14660.04000.0000-0.12940.3400-0.53992.14660.08000.0000-0.00280.2941-1.11072.14660.05880.0000-0.2098

Loss per epoch

training validation

Config

name: reference_bgl3_lr_modulof2
task: dms
data:
  dataset: bgl3
  encoding: one_hot,aa_index
  split_dir: null
  split_scheme: modulo
  split_fold: 2
model:
  name: lr
train:
  epochs: 300
  batch_size: 128
  learning_rate: 0.0001
  patience: 15
  min_delta: 1.0e-05
  seed: 7