Protein Engineering

bgl3 · Linear

reference_bgl3_lr_modulof4_20261104-165752

Metrics

Setmsepearsonrspearmanrr2above_wt_nabove_wt_spearmanrbudget_to_maxhit_rate_at_10mean_at_10max_at_10precision_at_10tie_share_at_10captured_at_10hit_rate_at_50mean_at_50max_at_50precision_at_50tie_share_at_50captured_at_50hit_rate_at_100mean_at_100max_at_100precision_at_100tie_share_at_100captured_at_100hit_rate_at_1pctmean_at_1pctmax_at_1pctprecision_at_1pcttie_share_at_1pctcaptured_at_1pct
train1.55880.52500.48890.17443798.00000.10025540.00000.70000.75041.86900.00000.00000.32300.74000.82092.20540.00000.00000.39600.75000.74772.31360.01000.00000.39460.74770.72432.31360.00930.00000.3886
validation1.5716-0.0973-0.0799-0.0434338.0000-0.0189991.00000.1000-1.47100.49590.00000.0000-0.33050.1800-0.96211.59450.02000.0000-0.16850.1900-0.99581.59450.05000.0000-0.20200.0769-1.71200.49590.00000.0000-0.4266
test1.4352-0.0334-0.0344-0.0602437.0000-0.05091023.00000.4000-0.18881.86900.00000.00000.07220.2600-0.50632.08410.04000.0000-0.04690.3000-0.43622.08410.10000.0000-0.01930.3125-0.22461.86900.00000.00000.0627

Loss per epoch

training validation

Config

name: reference_bgl3_lr_modulof4
task: dms
data:
  dataset: bgl3
  encoding: one_hot,aa_index
  split_dir: null
  split_scheme: modulo
  split_fold: 4
model:
  name: lr
train:
  epochs: 300
  batch_size: 128
  learning_rate: 0.0001
  patience: 15
  min_delta: 1.0e-05
  seed: 7