Protein Engineering

bgl3 · Linear

reference_bgl3_lr_plm_modulof4_20261105-042300

Metrics

Setmsepearsonrspearmanrr2above_wt_nabove_wt_spearmanrbudget_to_maxhit_rate_at_10mean_at_10max_at_10precision_at_10tie_share_at_10captured_at_10hit_rate_at_50mean_at_50max_at_50precision_at_50tie_share_at_50captured_at_50hit_rate_at_100mean_at_100max_at_100precision_at_100tie_share_at_100captured_at_100hit_rate_at_1pctmean_at_1pctmax_at_1pctprecision_at_1pcttie_share_at_1pctcaptured_at_1pct
train1.29810.57930.54240.31253798.00000.11063307.00000.90001.03671.69460.00000.00000.40570.68000.73312.94050.02000.00000.36680.74000.80032.94050.02000.00000.41320.75700.81822.94050.02800.00000.4221
validation1.38530.28520.26770.0803338.0000-0.20591151.00000.50000.02792.36370.10000.00000.21670.3400-0.36902.36370.02000.00000.08360.2600-0.40822.36370.05000.00000.07400.4615-0.18762.36370.07690.00000.1408
test1.28230.27850.26610.0527437.0000-0.16821452.00000.2000-0.46361.26500.00000.0000-0.02410.2800-0.23102.20540.04000.00000.06890.3000-0.17812.20540.05000.00000.10090.1250-0.46591.26500.00000.0000-0.0262

Loss per epoch

training validation

Config

name: reference_bgl3_lr_plm_modulof4
task: dms
data:
  dataset: bgl3
  encoding: one_hot,aa_index,plm,plm_sum
  split_dir: null
  split_scheme: modulo
  split_fold: 4
model:
  name: lr
train:
  epochs: 300
  batch_size: 128
  learning_rate: 0.0001
  patience: 15
  min_delta: 1.0e-05
  seed: 7