gb1 · Fully connected
reference_gb1_fc_contiguousf2_20261104-164014
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 0.2967 | 0.9604 | 0.9734 | 0.9096 | 40274.0000 | 0.7481 | 493.0000 | 1.0000 | 1.3117 | 1.4346 | 0.0000 | 0.0000 | 0.8731 | 1.0000 | 1.2134 | 1.4526 | 0.1200 | 0.0000 | 0.9067 | 1.0000 | 1.1658 | 1.4526 | 0.2500 | 0.0000 | 0.9227 | 0.9995 | 0.8501 | 1.8705 | 0.5531 | 0.0000 | 0.9492 |
| validation | 10.6345 | -0.2778 | -0.2886 | -0.9390 | 2473.0000 | 0.2072 | 2491.0000 | 0.0000 | -5.5824 | -5.0897 | 0.0000 | 0.0000 | -0.4329 | 0.0000 | -5.6176 | -4.6517 | 0.0000 | 0.0000 | -0.4477 | 0.0000 | -5.6250 | -4.6517 | 0.0000 | 0.0000 | -0.4553 | 0.0000 | -5.6394 | -4.6517 | 0.0000 | 0.0000 | -0.4675 |
| test | 11.7750 | -0.2528 | -0.2683 | -1.1829 | 2092.0000 | -0.0229 | 14951.0000 | 0.0000 | -4.9409 | -3.9008 | 0.0000 | 0.0000 | -0.2246 | 0.0000 | -5.4271 | -3.8867 | 0.0000 | 0.0000 | -0.3205 | 0.0000 | -5.4478 | -0.0324 | 0.0000 | 0.0000 | -0.3305 | 0.0100 | -5.3244 | 0.7688 | 0.0000 | 0.0000 | -0.3144 |
Loss per epoch
training
validation
Config
name: reference_gb1_fc_contiguousf2 task: dms data: dataset: gb1 encoding: one_hot,aa_index split_dir: null split_scheme: contiguous split_fold: 2 model: name: fcn hidden: - 1000 dropout: 0.2 train: epochs: 300 batch_size: 64 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7