gb1 · Fully connected
reference_gb1_fc_plm_contiguousf1_20261104-181706
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 0.2375 | 0.9787 | 0.9795 | 0.9525 | 33066.0000 | 0.8511 | 3079.0000 | 1.0000 | 1.5971 | 1.8220 | 0.2000 | 0.0000 | 0.9679 | 1.0000 | 1.5077 | 1.8220 | 0.4800 | 0.0000 | 0.9779 | 1.0000 | 1.4638 | 1.8220 | 0.5700 | 0.0000 | 0.9816 | 1.0000 | 1.0926 | 1.8220 | 0.7476 | 0.0000 | 0.9840 |
| validation | 5.7001 | 0.3824 | 0.3401 | -0.0567 | 2092.0000 | -0.0009 | 7841.0000 | 0.9000 | 0.5426 | 1.3758 | 0.0000 | 0.0000 | 0.7610 | 0.5600 | -0.4064 | 1.4575 | 0.0000 | 0.0000 | 0.6066 | 0.5200 | -0.7864 | 1.6366 | 0.0100 | 0.0000 | 0.5466 | 0.4776 | -1.0187 | 1.6366 | 0.0697 | 0.0000 | 0.5145 |
| test | 3.8331 | 0.0965 | 0.0780 | -0.8995 | 5403.0000 | -0.0158 | 1054.0000 | 0.7000 | 0.0181 | 0.7714 | 0.0000 | 0.0000 | 0.4367 | 0.6600 | -0.0118 | 0.8725 | 0.0000 | 0.0000 | 0.4584 | 0.6700 | -0.0149 | 0.8725 | 0.0000 | 0.0000 | 0.4754 | 0.6070 | -0.1602 | 0.8865 | 0.0100 | 0.0000 | 0.4259 |
Loss per epoch
training
validation
Config
name: reference_gb1_fc_plm_contiguousf1 task: dms data: dataset: gb1 encoding: one_hot,aa_index,plm,plm_sum split_dir: null split_scheme: contiguous split_fold: 1 model: name: fcn hidden: - 1000 dropout: 0.2 train: epochs: 300 batch_size: 64 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7