gb1 · Fully connected
reference_gb1_fc_plm_contiguousf2_20261104-184444
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 0.2377 | 0.9668 | 0.9776 | 0.9276 | 40274.0000 | 0.7655 | 709.0000 | 1.0000 | 1.2646 | 1.4346 | 0.0000 | 0.0000 | 0.8587 | 1.0000 | 1.2140 | 1.4526 | 0.1200 | 0.0000 | 0.9068 | 1.0000 | 1.1726 | 1.4636 | 0.2600 | 0.0000 | 0.9250 | 0.9979 | 0.8579 | 1.8705 | 0.5699 | 0.0000 | 0.9523 |
| validation | 7.7244 | 0.3494 | 0.3383 | -0.4084 | 2473.0000 | 0.0428 | 6954.0000 | 0.7000 | -0.6189 | 1.0255 | 0.0000 | 0.0000 | 0.5611 | 0.5200 | -0.9880 | 1.4054 | 0.0000 | 0.0000 | 0.4957 | 0.5100 | -1.0379 | 1.4054 | 0.0100 | 0.0000 | 0.4922 | 0.4950 | -1.1067 | 1.4054 | 0.0100 | 0.0000 | 0.4876 |
| test | 8.4437 | 0.3068 | 0.2665 | -0.5653 | 2092.0000 | -0.0132 | 8048.0000 | 0.7000 | -0.4463 | 1.3758 | 0.0000 | 0.0000 | 0.5832 | 0.4800 | -1.0017 | 1.4575 | 0.0000 | 0.0000 | 0.4966 | 0.4800 | -1.0924 | 1.6366 | 0.0100 | 0.0000 | 0.4890 | 0.4179 | -1.3346 | 1.6366 | 0.0647 | 0.0000 | 0.4537 |
Loss per epoch
training
validation
Config
name: reference_gb1_fc_plm_contiguousf2 task: dms data: dataset: gb1 encoding: one_hot,aa_index,plm,plm_sum split_dir: null split_scheme: contiguous split_fold: 2 model: name: fcn hidden: - 1000 dropout: 0.2 train: epochs: 300 batch_size: 64 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7