gb1 · Fully connected
reference_gb1_fc_plm_randomf1_20261104-180508
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 0.1849 | 0.9821 | 0.9816 | 0.9644 | 56332.0000 | 0.8838 | 1425.0000 | 1.0000 | 1.6975 | 1.9362 | 0.0000 | 0.0000 | 0.8963 | 1.0000 | 1.6291 | 1.9951 | 0.0600 | 0.0000 | 0.9190 | 1.0000 | 1.6323 | 2.1110 | 0.2100 | 0.0000 | 0.9391 | 1.0000 | 1.3066 | 2.4539 | 0.8134 | 0.0000 | 0.9889 |
| validation | 0.2031 | 0.9803 | 0.9794 | 0.9609 | 18825.0000 | 0.8767 | 356.0000 | 1.0000 | 1.6758 | 2.0942 | 0.1000 | 0.0000 | 0.9300 | 1.0000 | 1.6362 | 2.0942 | 0.3400 | 0.0000 | 0.9604 | 1.0000 | 1.6025 | 2.0942 | 0.4900 | 0.0000 | 0.9697 | 1.0000 | 1.3042 | 2.2859 | 0.8144 | 0.0000 | 0.9880 |
| test | 0.2068 | 0.9800 | 0.9790 | 0.9604 | 18879.0000 | 0.8786 | 47.0000 | 1.0000 | 1.6981 | 1.9240 | 0.0000 | 0.0000 | 0.9058 | 1.0000 | 1.7076 | 2.5295 | 0.4000 | 0.0000 | 0.9649 | 1.0000 | 1.6378 | 2.5295 | 0.5300 | 0.0000 | 0.9701 | 0.9991 | 1.3149 | 2.5295 | 0.8125 | 0.0000 | 0.9881 |
Loss per epoch
training
validation
Config
name: reference_gb1_fc_plm_randomf1 task: dms data: dataset: gb1 encoding: one_hot,aa_index,plm,plm_sum split_dir: null split_scheme: random split_fold: 1 model: name: fcn hidden: - 1000 dropout: 0.2 train: epochs: 300 batch_size: 64 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7