gb1 · Fully connected
reference_gb1_fc_plm_randomf2_20261104-182609
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 0.1946 | 0.9813 | 0.9805 | 0.9626 | 56269.0000 | 0.8743 | 90.0000 | 1.0000 | 1.6482 | 1.9362 | 0.0000 | 0.0000 | 0.8768 | 1.0000 | 1.6614 | 1.9362 | 0.1000 | 0.0000 | 0.9241 | 1.0000 | 1.6727 | 2.5295 | 0.2200 | 0.0000 | 0.9474 | 1.0000 | 1.3096 | 2.5295 | 0.8038 | 0.0000 | 0.9880 |
| validation | 0.2096 | 0.9797 | 0.9793 | 0.9596 | 18942.0000 | 0.8657 | 75.0000 | 1.0000 | 1.5956 | 1.8128 | 0.0000 | 0.0000 | 0.8945 | 1.0000 | 1.6014 | 2.1110 | 0.2000 | 0.0000 | 0.9424 | 1.0000 | 1.6112 | 2.2594 | 0.4600 | 0.0000 | 0.9629 | 1.0000 | 1.2921 | 2.2594 | 0.7910 | 0.0000 | 0.9872 |
| test | 0.2080 | 0.9799 | 0.9788 | 0.9600 | 18825.0000 | 0.8673 | 542.0000 | 1.0000 | 1.6870 | 2.0942 | 0.1000 | 0.0000 | 0.9325 | 1.0000 | 1.6231 | 2.0942 | 0.3000 | 0.0000 | 0.9573 | 1.0000 | 1.5983 | 2.0942 | 0.4700 | 0.0000 | 0.9686 | 1.0000 | 1.2993 | 2.2859 | 0.8078 | 0.0000 | 0.9867 |
Loss per epoch
training
validation
Config
name: reference_gb1_fc_plm_randomf2 task: dms data: dataset: gb1 encoding: one_hot,aa_index,plm,plm_sum split_dir: null split_scheme: random split_fold: 2 model: name: fcn hidden: - 1000 dropout: 0.2 train: epochs: 300 batch_size: 64 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7