gb1 · Fully connected
reference_gb1_fc_plm_randomf4_20261105-041414
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 0.1891 | 0.9817 | 0.9809 | 0.9636 | 56646.0000 | 0.8758 | 106.0000 | 1.0000 | 1.6623 | 1.9240 | 0.0000 | 0.0000 | 0.8794 | 1.0000 | 1.6903 | 2.1952 | 0.1400 | 0.0000 | 0.9325 | 1.0000 | 1.6804 | 2.1992 | 0.2500 | 0.0000 | 0.9517 | 1.0000 | 1.3098 | 2.5295 | 0.8175 | 0.0000 | 0.9893 |
| validation | 0.2087 | 0.9797 | 0.9787 | 0.9599 | 18587.0000 | 0.8670 | 511.0000 | 1.0000 | 1.6940 | 1.9951 | 0.1000 | 0.0000 | 0.9213 | 1.0000 | 1.6666 | 2.0975 | 0.3400 | 0.0000 | 0.9581 | 1.0000 | 1.6276 | 2.0975 | 0.5100 | 0.0000 | 0.9694 | 1.0000 | 1.2935 | 2.4539 | 0.7929 | 0.0000 | 0.9864 |
| test | 0.2059 | 0.9800 | 0.9791 | 0.9603 | 18803.0000 | 0.8752 | 77.0000 | 1.0000 | 1.6324 | 1.9362 | 0.1000 | 0.0000 | 0.9097 | 1.0000 | 1.5984 | 1.9888 | 0.2800 | 0.0000 | 0.9434 | 1.0000 | 1.5939 | 2.1455 | 0.4300 | 0.0000 | 0.9631 | 1.0000 | 1.3207 | 2.1455 | 0.8265 | 0.0000 | 0.9897 |
Loss per epoch
training
validation
Config
name: reference_gb1_fc_plm_randomf4 task: dms data: dataset: gb1 encoding: one_hot,aa_index,plm,plm_sum split_dir: null split_scheme: random split_fold: 4 model: name: fcn hidden: - 1000 dropout: 0.2 train: epochs: 300 batch_size: 64 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7