gb1 · Linear
reference_gb1_lr_contiguousf1_20261104-154244
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | captured_at_1pct | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 0.7937 | 0.9182 | 0.9480 | 0.8411 | 33066.0000 | 0.5717 | 3264.0000 | 1.0000 | 1.5387 | 1.8220 | 0.2000 | 0.9536 | 1.0000 | 1.4421 | 1.8220 | 0.2600 | 0.9614 | 1.0000 | 1.4040 | 1.8220 | 0.3900 | 0.9663 | 0.9958 | 0.9616 | 1.8220 | 0.5267 | 0.9467 | ||||
| validation | 9.7290 | -0.3273 | -0.3333 | -0.8036 | 2092.0000 | -0.3211 | 15165.0000 | 0.0000 | -5.6188 | -4.7732 | 0.0000 | 0.0000 | -0.3464 | 0.0000 | -5.4969 | -3.6619 | 0.0000 | 0.0000 | -0.3334 | 0.0000 | -5.3535 | -2.3389 | 0.0000 | 0.0000 | -0.3127 | 0.0000 | -5.1657 | -0.1855 | 0.0000 | 0.0000 | -0.2838 |
| test | 2.9687 | -0.0546 | 0.0122 | -0.4711 | 5403.0000 | 0.0782 | 6305.0000 | 0.5000 | -0.5663 | 0.5963 | 0.0000 | 0.0000 | 0.1893 | 0.3800 | -1.3206 | 0.7883 | 0.0000 | 0.0000 | -0.1405 | 0.4200 | -1.0053 | 0.8068 | 0.0000 | 0.0000 | 0.0039 | 0.3881 | -1.1251 | 1.0621 | 0.0100 | 0.0000 | -0.0557 |
Loss per epoch
training
validation
Config
name: reference_gb1_lr_contiguousf1 task: dms data: dataset: gb1 encoding: one_hot,aa_index split_dir: null split_scheme: contiguous split_fold: 1 model: name: lr train: epochs: 300 batch_size: 128 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7