Protein Engineering

gb1 · Linear

reference_gb1_lr_modulof4_20261104-170052

Metrics

Setmsepearsonrspearmanrr2above_wt_nabove_wt_spearmanrbudget_to_maxhit_rate_at_10mean_at_10max_at_10precision_at_10tie_share_at_10captured_at_10hit_rate_at_50mean_at_50max_at_50precision_at_50tie_share_at_50captured_at_50hit_rate_at_100mean_at_100max_at_100precision_at_100tie_share_at_100captured_at_100hit_rate_at_1pctmean_at_1pctmax_at_1pctprecision_at_1pcttie_share_at_1pctcaptured_at_1pct
train1.17680.88230.91130.769335489.00000.40272015.00001.00001.44011.84240.00000.00000.83441.00001.39842.05310.10000.00000.86720.99001.25812.05310.07000.00000.85240.96640.89392.20420.27120.00000.8575
validation6.4007-0.1200-0.0993-0.14672689.0000-0.05321664.00000.2000-4.55380.28600.00000.0000-0.44370.1800-4.28020.53550.00000.0000-0.39550.1300-4.21960.53550.00000.0000-0.38920.1642-4.09780.69450.00000.0000-0.3656
test4.87420.03010.0605-0.05493230.00000.2070822.00000.0000-3.7384-1.52530.00000.0000-0.38420.0400-3.15730.49390.00000.0000-0.24080.0400-2.98170.49390.00000.0000-0.19730.0547-3.03890.62370.00000.0000-0.2190

Loss per epoch

training validation

Config

name: reference_gb1_lr_modulof4
task: dms
data:
  dataset: gb1
  encoding: one_hot,aa_index
  split_dir: null
  split_scheme: modulo
  split_fold: 4
model:
  name: lr
train:
  epochs: 300
  batch_size: 128
  learning_rate: 0.0001
  patience: 15
  min_delta: 1.0e-05
  seed: 7