gb1 · Linear
reference_gb1_lr_mr20_contiguousf1_20261105-022209
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 1.1324 | 0.8858 | 0.9136 | 0.7756 | 32125.0000 | 0.4170 | 99.0000 | 1.0000 | 1.3990 | 1.5851 | 0.0000 | 0.0000 | 0.9346 | 1.0000 | 1.2645 | 1.6462 | 0.2000 | 0.0000 | 0.9241 | 0.9900 | 1.1983 | 1.8220 | 0.3000 | 0.0000 | 0.9187 | 0.9548 | 0.7827 | 1.8220 | 0.3554 | 0.0000 | 0.8981 |
| validation | 9.2752 | -0.3197 | -0.3261 | -0.7274 | 2049.0000 | -0.3284 | 17268.0000 | 0.0000 | -5.6188 | -4.7732 | 0.0000 | 0.0000 | -0.3461 | 0.0000 | -5.4876 | -3.6619 | 0.0000 | 0.0000 | -0.3300 | 0.0000 | -5.3208 | -2.3389 | 0.0000 | 0.0000 | -0.3046 | 0.0000 | -5.1530 | -0.1855 | 0.0000 | 0.0000 | -0.2790 |
| test | 3.1858 | -0.0619 | 0.0027 | -0.5790 | 5223.0000 | 0.0589 | 8691.0000 | 0.4000 | -0.7030 | 0.5963 | 0.0000 | 0.0000 | 0.1437 | 0.3200 | -1.4923 | 0.7883 | 0.0000 | 0.0000 | -0.2164 | 0.3700 | -1.2267 | 0.7883 | 0.0000 | 0.0000 | -0.0958 | 0.3232 | -1.3253 | 0.8068 | 0.0000 | 0.0000 | -0.1496 |
Loss per epoch
training
validation
Config
name: reference_gb1_lr_mr20_contiguousf1 task: dms data: dataset: gb1 encoding: one_hot,aa_index split_dir: null split_scheme: contiguous split_fold: 1 min_reads: 20 model: name: lr train: epochs: 300 batch_size: 128 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7