gb1 · Linear
reference_gb1_lr_mr20_randomf0_20261105-014823
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 0.7141 | 0.9294 | 0.9632 | 0.8637 | 54470.0000 | 0.8124 | 500.0000 | 1.0000 | 1.6191 | 1.9240 | 0.1000 | 0.0000 | 0.9186 | 1.0000 | 1.6311 | 1.9951 | 0.1600 | 0.0000 | 0.9500 | 1.0000 | 1.6089 | 1.9951 | 0.2500 | 0.0000 | 0.9565 | 0.9990 | 1.2624 | 2.1455 | 0.7714 | 0.0000 | 0.9836 |
| validation | 0.7212 | 0.9286 | 0.9631 | 0.8623 | 17972.0000 | 0.8046 | 5.0000 | 1.0000 | 1.6924 | 1.9362 | 0.4000 | 0.0000 | 0.9705 | 1.0000 | 1.6100 | 1.9362 | 0.4200 | 0.0000 | 0.9736 | 1.0000 | 1.5791 | 1.9362 | 0.5500 | 0.0000 | 0.9791 | 1.0000 | 1.2463 | 1.9362 | 0.7651 | 0.0000 | 0.9832 |
| test | 0.7164 | 0.9290 | 0.9632 | 0.8630 | 17938.0000 | 0.8126 | 53.0000 | 1.0000 | 1.6007 | 1.8527 | 0.1000 | 0.0000 | 0.9364 | 1.0000 | 1.5878 | 1.8666 | 0.3800 | 0.0000 | 0.9554 | 1.0000 | 1.5789 | 1.9672 | 0.4700 | 0.0000 | 0.9671 | 1.0000 | 1.2738 | 1.9672 | 0.7804 | 0.0000 | 0.9856 |
Loss per epoch
training
validation
Config
name: reference_gb1_lr_mr20_randomf0 task: dms data: dataset: gb1 encoding: one_hot,aa_index split_dir: null split_scheme: random split_fold: 0 min_reads: 20 model: name: lr train: epochs: 300 batch_size: 128 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7