gb1 · Linear
reference_gb1_lr_mr20_randomf1_20261105-020753
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 0.7128 | 0.9295 | 0.9633 | 0.8639 | 54274.0000 | 0.8145 | 406.0000 | 1.0000 | 1.6284 | 1.9240 | 0.1000 | 0.0000 | 0.9188 | 1.0000 | 1.6375 | 1.9951 | 0.1600 | 0.0000 | 0.9487 | 1.0000 | 1.6135 | 2.0176 | 0.2600 | 0.0000 | 0.9547 | 0.9994 | 1.2704 | 2.1455 | 0.7769 | 0.0000 | 0.9846 |
| validation | 0.7201 | 0.9287 | 0.9630 | 0.8625 | 18134.0000 | 0.8079 | 69.0000 | 1.0000 | 1.6556 | 1.7914 | 0.1000 | 0.0000 | 0.9575 | 1.0000 | 1.6354 | 1.8991 | 0.4200 | 0.0000 | 0.9758 | 1.0000 | 1.5797 | 1.9130 | 0.5200 | 0.0000 | 0.9753 | 0.9990 | 1.2528 | 1.9130 | 0.7728 | 0.0000 | 0.9835 |
| test | 0.7212 | 0.9286 | 0.9631 | 0.8623 | 17972.0000 | 0.8057 | 4.0000 | 1.0000 | 1.6924 | 1.9362 | 0.4000 | 0.0000 | 0.9705 | 1.0000 | 1.6146 | 1.9362 | 0.3800 | 0.0000 | 0.9747 | 1.0000 | 1.5782 | 1.9362 | 0.5400 | 0.0000 | 0.9789 | 1.0000 | 1.2474 | 1.9362 | 0.7756 | 0.0000 | 0.9835 |
Loss per epoch
training
validation
Config
name: reference_gb1_lr_mr20_randomf1 task: dms data: dataset: gb1 encoding: one_hot,aa_index split_dir: null split_scheme: random split_fold: 1 min_reads: 20 model: name: lr train: epochs: 300 batch_size: 128 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7