gb1 · Linear
reference_gb1_lr_mr20_randomf2_20261105-022517
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 0.7130 | 0.9294 | 0.9634 | 0.8638 | 54119.0000 | 0.8142 | 406.0000 | 1.0000 | 1.6173 | 1.9362 | 0.2000 | 0.0000 | 0.9223 | 1.0000 | 1.6528 | 1.9951 | 0.1800 | 0.0000 | 0.9561 | 1.0000 | 1.6117 | 1.9951 | 0.2800 | 0.0000 | 0.9575 | 0.9997 | 1.2648 | 2.1455 | 0.7740 | 0.0000 | 0.9848 |
| validation | 0.7200 | 0.9289 | 0.9628 | 0.8628 | 18127.0000 | 0.8149 | 29.0000 | 1.0000 | 1.6236 | 1.8269 | 0.1000 | 0.0000 | 0.9384 | 1.0000 | 1.6122 | 2.0176 | 0.3400 | 0.0000 | 0.9637 | 1.0000 | 1.5748 | 2.0176 | 0.5200 | 0.0000 | 0.9726 | 0.9990 | 1.2709 | 2.0176 | 0.7843 | 0.0000 | 0.9845 |
| test | 0.7201 | 0.9287 | 0.9629 | 0.8625 | 18134.0000 | 0.8101 | 80.0000 | 1.0000 | 1.6602 | 1.8375 | 0.1000 | 0.0000 | 0.9586 | 1.0000 | 1.6319 | 1.8991 | 0.4200 | 0.0000 | 0.9750 | 1.0000 | 1.5781 | 1.9130 | 0.5300 | 0.0000 | 0.9749 | 1.0000 | 1.2563 | 1.9130 | 0.7756 | 0.0000 | 0.9844 |
Loss per epoch
training
validation
Config
name: reference_gb1_lr_mr20_randomf2 task: dms data: dataset: gb1 encoding: one_hot,aa_index split_dir: null split_scheme: random split_fold: 2 min_reads: 20 model: name: lr train: epochs: 300 batch_size: 128 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7