gb1 · Linear
reference_gb1_lr_mr5_randomf1_20261105-011139
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 0.7141 | 0.9286 | 0.9628 | 0.8623 | 55995.0000 | 0.8014 | 114.0000 | 1.0000 | 1.6264 | 1.9240 | 0.0000 | 0.0000 | 0.8875 | 1.0000 | 1.6104 | 2.0942 | 0.1400 | 0.0000 | 0.9224 | 1.0000 | 1.6093 | 2.1110 | 0.2200 | 0.0000 | 0.9414 | 1.0000 | 1.2786 | 2.5295 | 0.7631 | 0.0000 | 0.9834 |
| validation | 0.7228 | 0.9280 | 0.9622 | 0.8612 | 18674.0000 | 0.8049 | 232.0000 | 1.0000 | 1.6669 | 1.9362 | 0.2000 | 0.0000 | 0.9330 | 1.0000 | 1.6287 | 2.0176 | 0.3200 | 0.0000 | 0.9575 | 1.0000 | 1.6195 | 2.0176 | 0.5600 | 0.0000 | 0.9734 | 0.9991 | 1.2656 | 2.0975 | 0.7610 | 0.0000 | 0.9821 |
| test | 0.7134 | 0.9290 | 0.9633 | 0.8630 | 18912.0000 | 0.8048 | 63.0000 | 1.0000 | 1.6521 | 1.7720 | 0.0000 | 0.0000 | 0.9292 | 1.0000 | 1.5988 | 1.9482 | 0.2400 | 0.0000 | 0.9509 | 1.0000 | 1.5937 | 2.1952 | 0.4600 | 0.0000 | 0.9654 | 0.9991 | 1.2855 | 2.1952 | 0.7544 | 0.0000 | 0.9807 |
Loss per epoch
training
validation
Config
name: reference_gb1_lr_mr5_randomf1 task: dms data: dataset: gb1 encoding: one_hot,aa_index split_dir: null split_scheme: random split_fold: 1 min_reads: 5 model: name: lr train: epochs: 300 batch_size: 128 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7