gb1 · Linear
reference_gb1_lr_mr5_randomf2_20261105-013254
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 0.7126 | 0.9289 | 0.9630 | 0.8629 | 56304.0000 | 0.8011 | 94.0000 | 1.0000 | 1.7106 | 2.0942 | 0.1000 | 0.0000 | 0.9031 | 1.0000 | 1.6087 | 2.0942 | 0.0800 | 0.0000 | 0.9244 | 1.0000 | 1.6224 | 2.5295 | 0.2000 | 0.0000 | 0.9454 | 0.9997 | 1.2804 | 2.5295 | 0.7674 | 0.0000 | 0.9825 |
| validation | 0.7179 | 0.9282 | 0.9629 | 0.8615 | 18603.0000 | 0.8007 | 56.0000 | 1.0000 | 1.6571 | 1.9951 | 0.1000 | 0.0000 | 0.9229 | 1.0000 | 1.5836 | 1.9951 | 0.2800 | 0.0000 | 0.9459 | 1.0000 | 1.5703 | 2.0888 | 0.4200 | 0.0000 | 0.9597 | 1.0000 | 1.2812 | 2.0888 | 0.7600 | 0.0000 | 0.9838 |
| test | 0.7231 | 0.9280 | 0.9622 | 0.8611 | 18674.0000 | 0.8028 | 247.0000 | 1.0000 | 1.6669 | 1.9362 | 0.2000 | 0.0000 | 0.9330 | 1.0000 | 1.6240 | 2.0176 | 0.3200 | 0.0000 | 0.9564 | 1.0000 | 1.6163 | 2.0176 | 0.5500 | 0.0000 | 0.9726 | 0.9991 | 1.2633 | 2.0975 | 0.7572 | 0.0000 | 0.9815 |
Loss per epoch
training
validation
Config
name: reference_gb1_lr_mr5_randomf2 task: dms data: dataset: gb1 encoding: one_hot,aa_index split_dir: null split_scheme: random split_fold: 2 min_reads: 5 model: name: lr train: epochs: 300 batch_size: 128 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7