Protein Engineering

gb1 · Linear

reference_gb1_lr_plm_randomf0_20261104-174539

Metrics

Setmsepearsonrspearmanrr2above_wt_nabove_wt_spearmanrbudget_to_maxhit_rate_at_10mean_at_10max_at_10precision_at_10tie_share_at_10captured_at_10hit_rate_at_50mean_at_50max_at_50precision_at_50tie_share_at_50captured_at_50hit_rate_at_100mean_at_100max_at_100precision_at_100tie_share_at_100captured_at_100hit_rate_at_1pctmean_at_1pctmax_at_1pctprecision_at_1pcttie_share_at_1pctcaptured_at_1pct
train0.70830.92930.96340.863656570.00000.80081047.00001.00001.73342.09420.10000.00000.90911.00001.60472.09420.04000.00000.91691.00001.60282.11100.19000.00000.93560.99941.28022.28590.75810.00000.9815
validation0.72280.92810.96250.861418879.00000.808937.00001.00001.70351.92400.00000.00000.90701.00001.67402.52950.36000.00000.95701.00001.62832.52950.52000.00000.96780.99911.28852.52950.75650.00000.9811
test0.72020.92820.96270.861518587.00000.7940547.00001.00001.70691.99510.10000.00000.92421.00001.64061.99510.32000.00000.95201.00001.61321.99510.47000.00000.96600.99911.27182.45390.76210.00000.9807

Loss per epoch

training validation

Config

name: reference_gb1_lr_plm_randomf0
task: dms
data:
  dataset: gb1
  encoding: one_hot,aa_index,plm,plm_sum
  split_dir: null
  split_scheme: random
  split_fold: 0
model:
  name: lr
train:
  epochs: 300
  batch_size: 128
  learning_rate: 0.0001
  patience: 15
  min_delta: 1.0e-05
  seed: 7