gb1 · Linear
reference_gb1_lr_plm_randomf2_20261104-182632
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 0.7127 | 0.9290 | 0.9631 | 0.8630 | 56269.0000 | 0.8081 | 96.0000 | 1.0000 | 1.6327 | 1.9362 | 0.0000 | 0.0000 | 0.8734 | 1.0000 | 1.6406 | 1.9951 | 0.1000 | 0.0000 | 0.9194 | 1.0000 | 1.6303 | 2.5295 | 0.1900 | 0.0000 | 0.9376 | 0.9994 | 1.2822 | 2.5295 | 0.7584 | 0.0000 | 0.9808 |
| validation | 0.7127 | 0.9287 | 0.9635 | 0.8625 | 18942.0000 | 0.7978 | 100.0000 | 1.0000 | 1.5896 | 1.7792 | 0.0000 | 0.0000 | 0.8931 | 1.0000 | 1.5877 | 2.1110 | 0.1800 | 0.0000 | 0.9392 | 1.0000 | 1.5823 | 2.2594 | 0.4100 | 0.0000 | 0.9560 | 0.9981 | 1.2716 | 2.2594 | 0.7556 | 0.0000 | 0.9817 |
| test | 0.7171 | 0.9285 | 0.9630 | 0.8621 | 18825.0000 | 0.7994 | 361.0000 | 1.0000 | 1.6603 | 2.0942 | 0.1000 | 0.0000 | 0.9265 | 1.0000 | 1.6173 | 2.0942 | 0.2800 | 0.0000 | 0.9559 | 1.0000 | 1.5875 | 2.0942 | 0.4500 | 0.0000 | 0.9661 | 1.0000 | 1.2863 | 2.2859 | 0.7715 | 0.0000 | 0.9832 |
Loss per epoch
training
validation
Config
name: reference_gb1_lr_plm_randomf2 task: dms data: dataset: gb1 encoding: one_hot,aa_index,plm,plm_sum split_dir: null split_scheme: random split_fold: 2 model: name: lr train: epochs: 300 batch_size: 128 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7