pab1 · Fully connected
reference_pab1_fc_contiguousf4_20261104-170949
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 1.8808 | 0.8387 | 0.8549 | 0.5474 | 1652.0000 | 0.0428 | 2118.0000 | 0.7000 | 0.0509 | 0.4410 | 0.0000 | 0.0000 | 0.7273 | 0.5400 | -0.0249 | 0.4896 | 0.0000 | 0.0000 | 0.7565 | 0.4400 | -0.1026 | 0.4896 | 0.0500 | 0.0000 | 0.7554 | 0.3667 | -0.1265 | 0.4974 | 0.0611 | 0.0000 | 0.7698 |
| validation | 3.7669 | -0.0767 | -0.0735 | -0.0163 | 222.0000 | 0.1835 | 1602.0000 | 0.0000 | -4.2698 | -1.7026 | 0.0000 | 0.0000 | -0.5391 | 0.0600 | -3.6462 | 0.4644 | 0.0400 | 0.0000 | -0.3535 | 0.0300 | -3.4095 | 0.4644 | 0.0200 | 0.0000 | -0.2819 | 0.0612 | -3.6673 | 0.4644 | 0.0408 | 0.0000 | -0.3603 |
| test | 4.9310 | -0.0143 | -0.0040 | -1.6435 | 931.0000 | 0.0611 | 3352.0000 | 0.3000 | -0.7338 | 0.4775 | 0.0000 | 0.0000 | 0.1327 | 0.2200 | -0.9261 | 0.5512 | 0.0000 | 0.0000 | 0.0438 | 0.1200 | -1.1710 | 0.5512 | 0.0200 | 0.0000 | -0.1032 | 0.2444 | -0.9853 | 0.5512 | 0.0000 | 0.0000 | 0.0100 |
Loss per epoch
training
validation
Config
name: reference_pab1_fc_contiguousf4 task: dms data: dataset: pab1 encoding: one_hot,aa_index split_dir: null split_scheme: contiguous split_fold: 4 model: name: fcn hidden: - 100 - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 128 learning_rate: 0.001 patience: 15 min_delta: 1.0e-05 seed: 7