pab1 · Fully connected
reference_pab1_fc_modulof0_20261104-144615
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | captured_at_1pct | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 1.4852 | 0.8082 | 0.7803 | 0.5988 | 1755.0000 | 0.0962 | 5923.0000 | 0.2000 | -0.2627 | 0.4410 | 0.0000 | 0.5454 | 0.3200 | -0.2001 | 0.6533 | 0.0200 | 0.6205 | 0.2700 | -0.1776 | 0.8908 | 0.0200 | 0.6579 | 0.2609 | -0.1838 | 0.8908 | 0.0145 | 0.6689 | ||||
| validation | 4.1597 | -0.3177 | -0.3190 | -0.0421 | 132.0000 | 0.1896 | 1017.0000 | 0.0000 | -3.7223 | -0.5088 | 0.0000 | 0.0000 | -0.5209 | 0.0400 | -3.8459 | 0.1133 | 0.0000 | 0.0000 | -0.6365 | 0.0400 | -3.7137 | 0.3930 | 0.0400 | 0.0000 | -0.6106 | 0.0000 | -4.0510 | -0.5088 | 0.0000 | 0.0000 | -0.6637 |
| test | 3.2683 | 0.0365 | 0.0461 | -0.0173 | 171.0000 | -0.0169 | 996.0000 | 0.0000 | -2.8594 | -0.0320 | 0.0000 | 0.0000 | -0.4133 | 0.0200 | -2.2236 | 0.0350 | 0.0000 | 0.0000 | -0.1866 | 0.0500 | -2.0894 | 0.2236 | 0.0300 | 0.0000 | -0.1314 | 0.0000 | -2.6244 | -0.0320 | 0.0000 | 0.0000 | -0.3381 |
Loss per epoch
training
validation
Config
name: reference_pab1_fc_modulof0 task: dms data: dataset: pab1 encoding: one_hot,aa_index split_dir: null split_scheme: modulo split_fold: 0 model: name: fcn hidden: - 100 - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 128 learning_rate: 0.001 patience: 15 min_delta: 1.0e-05 seed: 7