pab1 · Fully connected
reference_pab1_fc_modulof2_20261104-163612
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 1.6702 | 0.7624 | 0.7437 | 0.5592 | 1717.0000 | 0.0832 | 2063.0000 | 0.4000 | -0.0638 | 0.4516 | 0.0000 | 0.0000 | 0.6156 | 0.3800 | -0.1118 | 0.4681 | 0.0000 | 0.0000 | 0.6573 | 0.3900 | -0.0775 | 0.8618 | 0.0200 | 0.0000 | 0.7071 | 0.3856 | -0.0801 | 0.8618 | 0.0458 | 0.0000 | 0.7301 |
| validation | 3.6130 | -0.0553 | -0.0523 | -0.0337 | 223.0000 | 0.1160 | 1409.0000 | 0.1000 | -2.6870 | 0.3693 | 0.0000 | 0.0000 | -0.4244 | 0.0600 | -2.9606 | 0.3798 | 0.0400 | 0.0000 | -0.6084 | 0.0700 | -2.5749 | 0.3798 | 0.0400 | 0.0000 | -0.4509 | 0.0625 | -2.9352 | 0.3693 | 0.0000 | 0.0000 | -0.5475 |
| test | 3.6037 | -0.0071 | -0.0264 | -0.0039 | 116.0000 | -0.1340 | 1285.0000 | 0.1000 | -1.4229 | 0.0191 | 0.0000 | 0.0000 | 0.2072 | 0.1000 | -1.7696 | 0.3208 | 0.0400 | 0.0000 | 0.0720 | 0.0900 | -1.7995 | 0.4475 | 0.0700 | 0.0000 | 0.0616 | 0.1429 | -1.3580 | 0.3208 | 0.0000 | 0.0000 | 0.2380 |
Loss per epoch
training
validation
Config
name: reference_pab1_fc_modulof2 task: dms data: dataset: pab1 encoding: one_hot,aa_index split_dir: null split_scheme: modulo split_fold: 2 model: name: fcn hidden: - 100 - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 128 learning_rate: 0.001 patience: 15 min_delta: 1.0e-05 seed: 7