pab1 · Fully connected
reference_pab1_fc_modulof4_20261104-170210
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 1.1934 | 0.8391 | 0.8270 | 0.6907 | 1414.0000 | 0.0909 | 5415.0000 | 0.5000 | -0.0068 | 0.4681 | 0.0000 | 0.0000 | 0.6597 | 0.3200 | -0.1673 | 0.4681 | 0.0000 | 0.0000 | 0.6734 | 0.3100 | -0.1248 | 0.4681 | 0.0100 | 0.0000 | 0.7170 | 0.3427 | -0.1130 | 0.4681 | 0.0420 | 0.0000 | 0.7362 |
| validation | 3.2783 | -0.1095 | -0.1205 | -0.0205 | 171.0000 | 0.0180 | 1625.0000 | 0.1000 | -1.7369 | 0.2236 | 0.0000 | 0.0000 | 0.0332 | 0.0600 | -1.7444 | 0.2236 | 0.0200 | 0.0000 | 0.0352 | 0.0700 | -1.9364 | 0.4264 | 0.0500 | 0.0000 | -0.0566 | 0.1176 | -1.6158 | 0.2236 | 0.0000 | 0.0000 | 0.0860 |
| test | 3.7920 | -0.0873 | -0.0493 | -0.0200 | 234.0000 | 0.1973 | 531.0000 | 0.0000 | -4.1370 | -3.0573 | 0.0000 | 0.0000 | -1.1031 | 0.0200 | -2.6509 | 0.2014 | 0.0000 | 0.0000 | -0.4858 | 0.0900 | -2.2941 | 0.3444 | 0.0800 | 0.0000 | -0.3270 | 0.0000 | -3.4943 | -0.5111 | 0.0000 | 0.0000 | -0.8357 |
Loss per epoch
training
validation
Config
name: reference_pab1_fc_modulof4 task: dms data: dataset: pab1 encoding: one_hot,aa_index split_dir: null split_scheme: modulo split_fold: 4 model: name: fcn hidden: - 100 - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 128 learning_rate: 0.001 patience: 15 min_delta: 1.0e-05 seed: 7