pab1 · Linear
reference_pab1_lr_modulof1_20261104-153821
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | captured_at_1pct | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 2.4227 | 0.6406 | 0.5966 | 0.3256 | 1937.0000 | 0.0886 | 2542.0000 | 0.3000 | -0.4603 | 0.1955 | 0.0000 | 0.4696 | 0.3600 | -0.2719 | 0.7204 | 0.0200 | 0.5888 | 0.3300 | -0.2808 | 0.7204 | 0.0400 | 0.6118 | 0.2953 | -0.2785 | 0.8908 | 0.0671 | 0.6292 | ||||
| validation | 4.1418 | -0.1970 | -0.1829 | -0.1538 | 116.0000 | -0.0599 | 559.0000 | 0.0000 | -3.1776 | -0.6690 | 0.0000 | 0.0000 | -0.5100 | 0.0000 | -2.7277 | -0.1593 | 0.0000 | 0.0000 | -0.3586 | 0.0100 | -2.9207 | 0.1270 | 0.0100 | 0.0000 | -0.4685 | 0.0000 | -3.2803 | -0.6690 | 0.0000 | 0.0000 | -0.5620 |
| test | 4.5300 | -0.0687 | -0.0815 | -0.1348 | 132.0000 | -0.0559 | 835.0000 | 0.0000 | -2.3369 | -0.2961 | 0.0000 | 0.0000 | -0.0358 | 0.0000 | -2.3465 | -0.0277 | 0.0000 | 0.0000 | -0.0442 | 0.0200 | -2.5408 | 0.1666 | 0.0200 | 0.0000 | -0.1264 | 0.0000 | -2.4358 | -0.2961 | 0.0000 | 0.0000 | -0.0735 |
Loss per epoch
training
validation
Config
name: reference_pab1_lr_modulof1 task: dms data: dataset: pab1 encoding: one_hot,aa_index split_dir: null split_scheme: modulo split_fold: 1 model: name: lr train: epochs: 300 batch_size: 128 learning_rate: 0.001 patience: 15 min_delta: 1.0e-05 seed: 7