ube4b · Fully connected
reference_ube4b_fc_contiguousf1_20261104-154553
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | captured_at_1pct | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 2.3321 | 0.5360 | 0.5348 | 0.2613 | 9072.0000 | 0.2658 | 157.0000 | 0.9000 | 3.3373 | 6.1580 | 0.2000 | 0.5931 | 0.9400 | 3.0848 | 6.1580 | 0.1400 | 0.6467 | 0.9700 | 3.0657 | 7.5533 | 0.1500 | 0.7013 | 0.9484 | 2.5802 | 7.6288 | 0.3920 | 0.7623 | ||||
| validation | 5.8892 | 0.0327 | 0.0149 | -0.0154 | 88.0000 | 0.1050 | 287.0000 | 0.1000 | -2.7497 | 1.6652 | 0.0000 | 0.0000 | -0.1836 | 0.2000 | -1.9631 | 4.1694 | 0.1000 | 0.0000 | -0.0796 | 0.1900 | -1.9257 | 4.1694 | 0.2400 | 0.0000 | -0.0991 | 0.0000 | -3.0158 | -1.0409 | 0.0000 | 0.0000 | -0.2015 |
| test | 3.7484 | -0.0923 | -0.1079 | -0.0562 | 458.0000 | 0.1083 | 1239.0000 | 0.1000 | -1.8554 | 2.8717 | 0.0000 | 0.0000 | -0.0357 | 0.0600 | -2.1490 | 2.8717 | 0.0200 | 0.0000 | -0.1097 | 0.0700 | -2.0315 | 2.8717 | 0.0100 | 0.0000 | -0.0951 | 0.0769 | -2.3658 | 2.8717 | 0.0385 | 0.0000 | -0.1422 |
Loss per epoch
training
validation
Config
name: reference_ube4b_fc_contiguousf1 task: dms data: dataset: ube4b encoding: one_hot,aa_index split_dir: null split_scheme: contiguous split_fold: 1 model: name: fcn hidden: - 100 - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 64 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7