ube4b · Fully connected
reference_ube4b_fc_contiguousf3_20261104-162352
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | captured_at_1pct | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 2.6175 | 0.5883 | 0.5423 | 0.3259 | 5445.0000 | 0.4711 | 7213.0000 | 1.0000 | 5.5335 | 8.6246 | 0.3000 | 0.8017 | 0.9800 | 4.4094 | 8.6246 | 0.2000 | 0.7763 | 0.9500 | 3.8911 | 8.6246 | 0.3400 | 0.7568 | 0.9500 | 3.8048 | 8.6246 | 0.4727 | 0.8195 | ||||
| validation | 2.8439 | -0.1265 | -0.1207 | -0.0213 | 933.0000 | 0.0051 | 2063.0000 | 0.4000 | -1.2942 | 2.0624 | 0.0000 | 0.0000 | -0.0373 | 0.1800 | -1.7498 | 2.0624 | 0.0000 | 0.0000 | -0.1578 | 0.2600 | -1.5617 | 3.4997 | 0.0200 | 0.0000 | -0.1306 | 0.1579 | -1.8123 | 2.0624 | 0.0000 | 0.0000 | -0.1636 |
| test | 4.3991 | -0.1320 | -0.1176 | -0.1720 | 323.0000 | -0.0947 | 2388.0000 | 0.0000 | -2.8535 | -0.9357 | 0.0000 | 0.0000 | -0.1273 | 0.0000 | -2.8503 | -0.1485 | 0.0000 | 0.0000 | -0.1596 | 0.0200 | -2.7579 | 0.7786 | 0.0000 | 0.0000 | -0.1654 | 0.0000 | -2.9990 | -0.9357 | 0.0000 | 0.0000 | -0.1672 |
Loss per epoch
training
validation
Config
name: reference_ube4b_fc_contiguousf3 task: dms data: dataset: ube4b encoding: one_hot,aa_index split_dir: null split_scheme: contiguous split_fold: 3 model: name: fcn hidden: - 100 - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 64 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7