ube4b · Fully connected
reference_ube4b_fc_contiguousf4_20261104-171023
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 2.7237 | 0.6481 | 0.5878 | 0.3607 | 2870.0000 | 0.5699 | 1.0000 | 1.0000 | 6.3891 | 9.1845 | 0.5000 | 0.0000 | 0.9401 | 1.0000 | 4.4687 | 9.1845 | 0.4600 | 0.0000 | 0.8265 | 0.9600 | 3.6876 | 9.1845 | 0.3900 | 0.0000 | 0.7801 | 0.9649 | 3.4147 | 9.1845 | 0.4094 | 0.0000 | 0.7954 |
| validation | 2.4654 | -0.0693 | -0.0553 | -0.0851 | 1218.0000 | -0.0093 | 2200.0000 | 0.2000 | -1.7792 | 0.6961 | 0.0000 | 0.0000 | -0.1860 | 0.1400 | -1.5067 | 1.0185 | 0.0000 | 0.0000 | -0.1650 | 0.1800 | -1.3419 | 1.2931 | 0.0000 | 0.0000 | -0.1448 | 0.0698 | -1.6343 | 1.0185 | 0.0000 | 0.0000 | -0.1903 |
| test | 3.0355 | -0.2564 | -0.2046 | -0.0901 | 933.0000 | -0.0368 | 2656.0000 | 0.0000 | -2.4776 | -0.6627 | 0.0000 | 0.0000 | -0.2607 | 0.0200 | -3.0285 | 0.7461 | 0.0000 | 0.0000 | -0.4666 | 0.0400 | -2.9581 | 0.8717 | 0.0000 | 0.0000 | -0.5229 | 0.0263 | -3.0196 | 0.7461 | 0.0000 | 0.0000 | -0.4395 |
Loss per epoch
training
validation
Config
name: reference_ube4b_fc_contiguousf4 task: dms data: dataset: ube4b encoding: one_hot,aa_index split_dir: null split_scheme: contiguous split_fold: 4 model: name: fcn hidden: - 100 - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 64 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7