ube4b · Fully connected
reference_ube4b_fc_modulof3_20261104-161621
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | captured_at_1pct | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 2.6685 | 0.5833 | 0.5487 | 0.3249 | 7842.0000 | 0.4963 | 84.0000 | 1.0000 | 4.9979 | 6.7153 | 0.1000 | 0.7029 | 0.9800 | 4.4648 | 8.6246 | 0.2800 | 0.7485 | 0.9300 | 3.7398 | 9.1537 | 0.3000 | 0.7016 | 0.9366 | 3.4193 | 9.1537 | 0.4294 | 0.7635 | ||||
| validation | 3.5164 | 0.0275 | 0.0103 | -0.0159 | 318.0000 | 0.0288 | 1115.0000 | 0.2000 | -1.3464 | 0.5597 | 0.0000 | 0.0000 | 0.0459 | 0.1600 | -1.8692 | 2.0416 | 0.0200 | 0.0000 | -0.0636 | 0.1700 | -1.6475 | 2.9324 | 0.0700 | 0.0000 | -0.0119 | 0.1667 | -1.5767 | 2.0416 | 0.0000 | 0.0000 | 0.0057 |
| test | 3.0590 | -0.0350 | -0.0202 | -0.0100 | 418.0000 | 0.0651 | 908.0000 | 0.0000 | -3.4047 | -0.4820 | 0.0000 | 0.0000 | -0.4493 | 0.2000 | -1.6577 | 4.1157 | 0.0400 | 0.0000 | -0.0990 | 0.2400 | -1.6243 | 4.1157 | 0.0700 | 0.0000 | -0.1045 | 0.0556 | -2.9121 | 0.1612 | 0.0000 | 0.0000 | -0.3718 |
Loss per epoch
training
validation
Config
name: reference_ube4b_fc_modulof3 task: dms data: dataset: ube4b encoding: one_hot,aa_index split_dir: null split_scheme: modulo split_fold: 3 model: name: fcn hidden: - 100 - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 64 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7