ube4b · Fully connected
reference_ube4b_fc_plm_contiguousf3_20261105-040920
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 2.1860 | 0.6852 | 0.6441 | 0.4370 | 5445.0000 | 0.4835 | 4744.0000 | 1.0000 | 4.7193 | 6.4339 | 0.1000 | 0.0000 | 0.7044 | 1.0000 | 4.8280 | 8.6246 | 0.3000 | 0.0000 | 0.8345 | 1.0000 | 4.5508 | 8.6246 | 0.4300 | 0.0000 | 0.8553 | 1.0000 | 4.3135 | 8.6246 | 0.6045 | 0.0000 | 0.9031 |
| validation | 2.3325 | 0.4067 | 0.3333 | 0.1624 | 933.0000 | -0.0567 | 1167.0000 | 0.3000 | -1.1233 | 0.4160 | 0.0000 | 0.0000 | -0.0051 | 0.2800 | -0.7475 | 1.5456 | 0.0000 | 0.0000 | 0.0843 | 0.2800 | -0.7458 | 1.5456 | 0.0000 | 0.0000 | 0.0985 | 0.2632 | -0.7905 | 1.0561 | 0.0000 | 0.0000 | 0.0700 |
| test | 3.5811 | 0.3267 | 0.3498 | 0.0459 | 323.0000 | -0.0874 | 484.0000 | 0.3000 | -0.1808 | 0.7848 | 0.0000 | 0.0000 | 0.2584 | 0.3200 | -0.4107 | 3.1584 | 0.0200 | 0.0000 | 0.2835 | 0.3200 | -0.4348 | 3.8792 | 0.0700 | 0.0000 | 0.3233 | 0.2400 | -0.6260 | 0.7848 | 0.0000 | 0.0000 | 0.2190 |
Loss per epoch
training
validation
Config
name: reference_ube4b_fc_plm_contiguousf3 task: dms data: dataset: ube4b encoding: one_hot,aa_index,plm,plm_sum split_dir: null split_scheme: contiguous split_fold: 3 model: name: fcn hidden: - 100 - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 64 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7