ube4b · Fully connected
reference_ube4b_fc_plm_randomf1_20261104-180738
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 1.9811 | 0.6912 | 0.6562 | 0.4770 | 12540.0000 | 0.4600 | 97.0000 | 1.0000 | 5.5524 | 7.7437 | 0.2000 | 0.0000 | 0.7698 | 1.0000 | 5.2984 | 8.6246 | 0.2800 | 0.0000 | 0.8498 | 1.0000 | 5.1774 | 9.1537 | 0.3900 | 0.0000 | 0.8838 | 1.0000 | 3.9888 | 9.1537 | 0.5797 | 0.0000 | 0.8971 |
| validation | 2.1411 | 0.6633 | 0.6220 | 0.4396 | 4076.0000 | 0.4470 | 1.0000 | 1.0000 | 5.6710 | 9.1845 | 0.2000 | 0.0000 | 0.7998 | 1.0000 | 4.8009 | 9.1845 | 0.3800 | 0.0000 | 0.8525 | 0.9900 | 4.4156 | 9.1845 | 0.4500 | 0.0000 | 0.8693 | 0.9898 | 3.9933 | 9.1845 | 0.5939 | 0.0000 | 0.8849 |
| test | 2.1097 | 0.6663 | 0.6243 | 0.4431 | 4135.0000 | 0.4476 | 201.0000 | 1.0000 | 5.1514 | 6.5758 | 0.1000 | 0.0000 | 0.8118 | 1.0000 | 4.3161 | 6.5758 | 0.3400 | 0.0000 | 0.8036 | 1.0000 | 4.2973 | 6.5758 | 0.4900 | 0.0000 | 0.8668 | 0.9898 | 3.8499 | 6.5758 | 0.5279 | 0.0000 | 0.8730 |
Loss per epoch
training
validation
Config
name: reference_ube4b_fc_plm_randomf1 task: dms data: dataset: ube4b encoding: one_hot,aa_index,plm,plm_sum split_dir: null split_scheme: random split_fold: 1 model: name: fcn hidden: - 100 - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 64 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7