ube4b · Fully connected
reference_ube4b_fc_plm_randomf2_20261104-183147
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 1.9886 | 0.6901 | 0.6536 | 0.4754 | 12472.0000 | 0.4607 | 66.0000 | 1.0000 | 5.5513 | 7.7437 | 0.2000 | 0.0000 | 0.7589 | 1.0000 | 5.3232 | 8.6246 | 0.2800 | 0.0000 | 0.8482 | 1.0000 | 5.0760 | 9.1537 | 0.3900 | 0.0000 | 0.8676 | 0.9966 | 4.0141 | 9.1537 | 0.5898 | 0.0000 | 0.8982 |
| validation | 2.0885 | 0.6693 | 0.6343 | 0.4476 | 4203.0000 | 0.4372 | 101.0000 | 1.0000 | 5.3989 | 6.7153 | 0.3000 | 0.0000 | 0.8608 | 1.0000 | 4.7113 | 6.7153 | 0.4000 | 0.0000 | 0.8701 | 1.0000 | 4.4383 | 6.7778 | 0.5700 | 0.0000 | 0.8998 | 1.0000 | 3.8467 | 6.9328 | 0.5330 | 0.0000 | 0.8814 |
| test | 2.1430 | 0.6627 | 0.6215 | 0.4391 | 4076.0000 | 0.4456 | 1.0000 | 1.0000 | 5.6873 | 9.1845 | 0.2000 | 0.0000 | 0.8016 | 1.0000 | 4.8590 | 9.1845 | 0.4200 | 0.0000 | 0.8604 | 1.0000 | 4.4750 | 9.1845 | 0.4600 | 0.0000 | 0.8782 | 0.9949 | 3.9906 | 9.1845 | 0.5736 | 0.0000 | 0.8845 |
Loss per epoch
training
validation
Config
name: reference_ube4b_fc_plm_randomf2 task: dms data: dataset: ube4b encoding: one_hot,aa_index,plm,plm_sum split_dir: null split_scheme: random split_fold: 2 model: name: fcn hidden: - 100 - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 64 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7