ube4b · Fully connected
reference_ube4b_fc_plm_randomf4_20261105-041921
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 2.0095 | 0.6861 | 0.6494 | 0.4707 | 12414.0000 | 0.4576 | 2.0000 | 1.0000 | 6.2382 | 9.1845 | 0.1000 | 0.0000 | 0.8402 | 1.0000 | 5.2608 | 9.1845 | 0.2600 | 0.0000 | 0.8372 | 1.0000 | 5.0564 | 9.1845 | 0.4100 | 0.0000 | 0.8666 | 0.9932 | 3.9929 | 9.1845 | 0.5729 | 0.0000 | 0.8955 |
| validation | 2.1279 | 0.6568 | 0.6198 | 0.4308 | 4174.0000 | 0.4153 | 31.0000 | 1.0000 | 5.0271 | 7.8259 | 0.2000 | 0.0000 | 0.7622 | 1.0000 | 4.8751 | 8.6246 | 0.3800 | 0.0000 | 0.8717 | 1.0000 | 4.4225 | 8.6246 | 0.4700 | 0.0000 | 0.8833 | 0.9898 | 3.8652 | 8.6246 | 0.5888 | 0.0000 | 0.8754 |
| test | 2.1412 | 0.6661 | 0.6296 | 0.4431 | 4163.0000 | 0.4566 | 110.0000 | 1.0000 | 5.4504 | 7.7437 | 0.2000 | 0.0000 | 0.8240 | 1.0000 | 4.5431 | 7.7437 | 0.3400 | 0.0000 | 0.8298 | 1.0000 | 4.3555 | 7.7437 | 0.4500 | 0.0000 | 0.8698 | 0.9848 | 3.8276 | 9.1537 | 0.5330 | 0.0000 | 0.8642 |
Loss per epoch
training
validation
Config
name: reference_ube4b_fc_plm_randomf4 task: dms data: dataset: ube4b encoding: one_hot,aa_index,plm,plm_sum split_dir: null split_scheme: random split_fold: 4 model: name: fcn hidden: - 100 - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 64 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7