ube4b · Fully connected
reference_ube4b_fc_randomf4_20261104-165127
Metrics
| Set | mse | pearsonr | spearmanr | r2 | above_wt_n | above_wt_spearmanr | budget_to_max | hit_rate_at_10 | mean_at_10 | max_at_10 | precision_at_10 | tie_share_at_10 | captured_at_10 | hit_rate_at_50 | mean_at_50 | max_at_50 | precision_at_50 | tie_share_at_50 | captured_at_50 | hit_rate_at_100 | mean_at_100 | max_at_100 | precision_at_100 | tie_share_at_100 | captured_at_100 | hit_rate_at_1pct | mean_at_1pct | max_at_1pct | precision_at_1pct | tie_share_at_1pct | captured_at_1pct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| train | 1.9702 | 0.6953 | 0.6598 | 0.4811 | 12414.0000 | 0.4641 | 2.0000 | 1.0000 | 6.4988 | 9.1845 | 0.2000 | 0.0000 | 0.8688 | 1.0000 | 5.3778 | 9.1845 | 0.3000 | 0.0000 | 0.8519 | 1.0000 | 5.0884 | 9.1845 | 0.4200 | 0.0000 | 0.8709 | 1.0000 | 4.0579 | 9.1845 | 0.5864 | 0.0000 | 0.9063 |
| validation | 2.1815 | 0.6456 | 0.6076 | 0.4165 | 4174.0000 | 0.4246 | 32.0000 | 1.0000 | 5.0409 | 7.8259 | 0.2000 | 0.0000 | 0.7638 | 1.0000 | 4.6226 | 8.6246 | 0.3800 | 0.0000 | 0.8367 | 0.9900 | 4.3997 | 8.6246 | 0.5100 | 0.0000 | 0.8799 | 0.9797 | 3.7627 | 8.6246 | 0.5584 | 0.0000 | 0.8584 |
| test | 2.1976 | 0.6549 | 0.6178 | 0.4285 | 4163.0000 | 0.4643 | 49.0000 | 1.0000 | 5.5499 | 7.7437 | 0.3000 | 0.0000 | 0.8359 | 1.0000 | 4.7356 | 9.1537 | 0.3400 | 0.0000 | 0.8566 | 1.0000 | 4.3575 | 9.1537 | 0.4600 | 0.0000 | 0.8701 | 0.9848 | 3.8355 | 9.1537 | 0.5482 | 0.0000 | 0.8655 |
Loss per epoch
training
validation
Config
name: reference_ube4b_fc_randomf4 task: dms data: dataset: ube4b encoding: one_hot,aa_index split_dir: null split_scheme: random split_fold: 4 model: name: fcn hidden: - 100 - 100 - 100 dropout: 0.2 train: epochs: 300 batch_size: 64 learning_rate: 0.0001 patience: 15 min_delta: 1.0e-05 seed: 7